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| people:fangq 2022/11/17 22:34 | people:fangq 2024/11/13 10:18 current | ||
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| {{ :people:profile:qiyin-fang_v1.jpg?200|Qiyin Fang}} \\ | {{ :people:profile:qiyin-fang_v1.jpg?200|Qiyin Fang}} \\ | ||
| - | **[[https://www.eng.mcmaster.ca/engphys/people/faculty/qiyin-fang|Qiyin Fang, PhD 方淇音]]** \\ | + | **[[https://experts.mcmaster.ca/display/qfang|Qiyin Fang, PhD 方淇音]]** \\ |
| **[[https://spie.org/membership/explore-membership/fellows?SSO=1|Fellow, SPIE]]** \\ | **[[https://spie.org/membership/explore-membership/fellows?SSO=1|Fellow, SPIE]]** \\ | ||
| **Professor of Engineering Physics** \\ | **Professor of Engineering Physics** \\ | ||
| Line 57: | Line 57: | ||
| ==== Fluorescence Lifetime Imaging (FLIM) ==== | ==== Fluorescence Lifetime Imaging (FLIM) ==== | ||
| - | * Ian H. D. Phillips, David Armstrong and Qiyin Fang, "A Real-Time Endoscope Motion Tracker," IEEE Journal of Translational Engineering in Health and Medicine, 10:1-9, 2022, ([[http://doi.org/10.1109/JTEHM.2022.3214148|Open Access]]). | + | * Xu Mei, Qiyin Fang, and P. Ravi Selvaganapathy, "Three-dimensional oxygen concentration monitoring in hydrogels using low-cost phosphorescence lifetime imaging for tissue engineering," Biomed. Opt. Express 14, 4759-4774 (2023) [[https://opg.optica.org/boe/fulltext.cfm?uri=boe-14-9-4759|Open Access]] |
| + | * Elizabeth J. Osterlund, Nehad Hirmiz, Dang Nguyen, James M. Pemberton, Qiyin Fang, David Andrews, "Endoplasmic reticulum protein BIK binds to and inhibits mitochondria-localized anti-apoptotic proteins" Journal of Biological Chemistry, 299(4):104581, 2023, [[https://doi.org/10.1016/j.jbc.2022.102863|Online doi: 10.1016/j.jbc.2022.102863]] | ||
| * Elizabeth J. Osterlund, Nehad Hirmiz, James M. Pemberton, Qiyin Fang, David Andrews, "Automated, quantitative Fast FLIM-FRET (qF3):A step-by-step protocol to measure dissociation constants for protein-protein interactions in live-cell screening applications," Protocol Exchange, 25 April 2022, [[https://doi.org/10.21203/rs.3.pex-1354/v1|Online doi: 10.21203/rs.3.pex-1354]] | * Elizabeth J. Osterlund, Nehad Hirmiz, James M. Pemberton, Qiyin Fang, David Andrews, "Automated, quantitative Fast FLIM-FRET (qF3):A step-by-step protocol to measure dissociation constants for protein-protein interactions in live-cell screening applications," Protocol Exchange, 25 April 2022, [[https://doi.org/10.21203/rs.3.pex-1354/v1|Online doi: 10.21203/rs.3.pex-1354]] | ||
| * Elizabeth J. Osterlund, Nehad Hirmiz, James M. Pemberton, Adrien Nougarede, Qian Liu, Brian Leber, Qiyin Fang, and David W. Andrews, "Efficacy and specificity of inhibitors of BCL-2 family protein interactions assessed by affinity measurements in live cells," Science Advances, 8(16): 2022, doi: 10.1126/sciadv.abm7375 ([[https://doi.org/10.1126/sciadv.abm7375|Open Access]]) | * Elizabeth J. Osterlund, Nehad Hirmiz, James M. Pemberton, Adrien Nougarede, Qian Liu, Brian Leber, Qiyin Fang, and David W. Andrews, "Efficacy and specificity of inhibitors of BCL-2 family protein interactions assessed by affinity measurements in live cells," Science Advances, 8(16): 2022, doi: 10.1126/sciadv.abm7375 ([[https://doi.org/10.1126/sciadv.abm7375|Open Access]]) | ||
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| ==== Time-resolved Fluorescence in Optical Biopsy ==== | ==== Time-resolved Fluorescence in Optical Biopsy ==== | ||
| + | * Erica Dao, Gabriella Gohla, Phillip Williams, Peter Lovrics, Fares Badr, Qiyin Fang, Thomas J. Farrell, Michael J. Farquharson, "Multivariate analysis of breast tissue using optical parameters extracted from a combined time-resolved fluorescence and diffuse reflectance system for tumor margin detection," J. Biomed. Opt. 28(8) 085001, [[https://doi.org/10.1117/1.JBO.28.8.085001|Open Access]] | ||
| + | * Erica Dao, Gabriela Gohla, Phillip Williams, Peter Lovrics, Fares Badr, Qiyin Fang, Thomas Farrell, Michael Farquharson, "Breast tissue analysis using a clinically compatible combined time-resolved fluorescence and diffuse reflectance (TRF-DR) system," Lasers Surg Med. 2023; 55(8):769-783. [[https://doi.org/10.1002/lsm.23710|online]] | ||
| * N. Shalaby, A. Al-Ebraheem, D. Le, S. Cornacchi, Q. Fang, T. Farrell, P. Lovrics, G. Gohla, S. Reid, N. Hodgson, M. Farquharson, “Time-Resolved Fluorescence (TRF) and Diffuse Reflectance Spectroscopy (DRS) for Margin Analysis in Breast Cancer,” Lasers in Surgery and Medicine,50(3):236–245, 2018 ({{:public:publications:fangq_shalabyn_2018_tr-breast.pdf|PDF}}) | * N. Shalaby, A. Al-Ebraheem, D. Le, S. Cornacchi, Q. Fang, T. Farrell, P. Lovrics, G. Gohla, S. Reid, N. Hodgson, M. Farquharson, “Time-Resolved Fluorescence (TRF) and Diffuse Reflectance Spectroscopy (DRS) for Margin Analysis in Breast Cancer,” Lasers in Surgery and Medicine,50(3):236–245, 2018 ({{:public:publications:fangq_shalabyn_2018_tr-breast.pdf|PDF}}) | ||
| * Zhaojun Nie, Shu-Chi Allison Yeh, Michelle LePalud, Fares Badr, Frances Tse, David Armstrong, Louis W. C. Liu, M. Jamal Deen, and Qiyin Fang, "Optical Biopsy of the Upper GI Tract Using Fluorescence Lifetime and Spectra," Frontiers in Physiology, 11:339, 2020, doi.org/10.3389/fphys.2020.00339| ([[https://doi.org/10.3389/fphys.2020.00339|open access online]]) | * Zhaojun Nie, Shu-Chi Allison Yeh, Michelle LePalud, Fares Badr, Frances Tse, David Armstrong, Louis W. C. Liu, M. Jamal Deen, and Qiyin Fang, "Optical Biopsy of the Upper GI Tract Using Fluorescence Lifetime and Spectra," Frontiers in Physiology, 11:339, 2020, doi.org/10.3389/fphys.2020.00339| ([[https://doi.org/10.3389/fphys.2020.00339|open access online]]) | ||
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| ==== Micro-and-Nano Sensing ==== | ==== Micro-and-Nano Sensing ==== | ||
| + | * Xu Mei, Qiyin Fang, and P. Ravi Selvaganapathy, "Three-dimensional oxygen concentration monitoring in hydrogels using low-cost phosphorescence lifetime imaging for tissue engineering," Biomed. Opt. Express 14, 4759-4774 (2023) [[https://opg.optica.org/boe/fulltext.cfm?uri=boe-14-9-4759|Open Access]] | ||
| * Bo Xiong, Eric Mahoney, Joe F. Lo, Qiyin Fang, "A Frequency-domain optofluidic dissolved oxygen sensor with total internal reflection design for in situ monitoring", IEEE Selected Topics in Quantum Electronics, 27(4):1-7 2021, doi.org/10.1109/JSTQE.2020.2997810 ({{:public:publications:do_time_2020_jstqe_pre.pdf|Preprint PDF}}) | * Bo Xiong, Eric Mahoney, Joe F. Lo, Qiyin Fang, "A Frequency-domain optofluidic dissolved oxygen sensor with total internal reflection design for in situ monitoring", IEEE Selected Topics in Quantum Electronics, 27(4):1-7 2021, doi.org/10.1109/JSTQE.2020.2997810 ({{:public:publications:do_time_2020_jstqe_pre.pdf|Preprint PDF}}) | ||
| * Eric James Mahoney, Bo Xiong, and Qiyin Fang, "Optical model of light propagation in total internal reflection fluorescence sensors," Applied Optics 59(34):10651-10660, 2020, doi:10.1364/AO.404112 ([[https://doi.org/10.1364/AO.404112|online]]) | * Eric James Mahoney, Bo Xiong, and Qiyin Fang, "Optical model of light propagation in total internal reflection fluorescence sensors," Applied Optics 59(34):10651-10660, 2020, doi:10.1364/AO.404112 ([[https://doi.org/10.1364/AO.404112|online]]) | ||
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| ==== GI Endoscopic Imaging ==== | ==== GI Endoscopic Imaging ==== | ||
| + | * Ian H. D. Phillips, David Armstrong and Qiyin Fang, "A Real-Time Endoscope Motion Tracker," IEEE Journal of Translational Engineering in Health and Medicine, 10:1-9, 2022, ([[http://doi.org/10.1109/JTEHM.2022.3214148|Open Access]]). | ||
| * Samir Sahli, Roy, C. C. Wang, Aparna Murthy, David Armstrong, M. Jamal Deen, and Qiyin Fang, "a 360 degree side view endoscope for lower GI tract mapping," Physics in Canada, 75(1): 18-20, 2015 | * Samir Sahli, Roy, C. C. Wang, Aparna Murthy, David Armstrong, M. Jamal Deen, and Qiyin Fang, "a 360 degree side view endoscope for lower GI tract mapping," Physics in Canada, 75(1): 18-20, 2015 | ||
| * Shu-Chi Allison Yeh, Celine S.N. Ling, David W. Andrews, Michael S. Patterson, Kevin R. Diamond, Joseph E. Hayward, David Armstrong, and Qiyin Fang, "5-aminolevulinic acid for quantitative seek-and-treat of high-grade dysplasia in Barrett’s Esophagus cellular models," Journal of Biomedical Optics, 20(2):028002, 2015 ({{:public:publications:allison_be_ablation_2015.pdf|PDF}}). | * Shu-Chi Allison Yeh, Celine S.N. Ling, David W. Andrews, Michael S. Patterson, Kevin R. Diamond, Joseph E. Hayward, David Armstrong, and Qiyin Fang, "5-aminolevulinic acid for quantitative seek-and-treat of high-grade dysplasia in Barrett’s Esophagus cellular models," Journal of Biomedical Optics, 20(2):028002, 2015 ({{:public:publications:allison_be_ablation_2015.pdf|PDF}}). | ||
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| === Laser Ablation & Additive Manufacturing === | === Laser Ablation & Additive Manufacturing === | ||
| + | * Jacob Saunders, M. Elbestawi, and Qiyin Fang, "Ultrafast Laser Additive Manufacturing: A Review," J. Manuf. Mater. Process. 2023, 7, 89. [[https://doi.org/10.3390/jmmp7030089|Open Access doi:10.3390/jmmp7030089]] | ||
| + | * Joseph Deering, Dalia Mahmoud, Elyse Rier, Yujing Lin, Anna Cecilia do Nascimento Pereira, Silvia Titotto, Qiyin Fang, Gregory R. Wohl, Feilong Deng, Kathryn Grandfield, Mohamed A. Elbestawi, Jianyu Chen, "Osseointegration of functionally graded Ti6Al4V porous implants: Histology of the pore network," Biomaterials Advances, 155, 213697, 2023, [[https://doi.org/10.1016/j.bioadv.2023.213697|/doi 10.1016/j.bioadv.2023.213697]] | ||
| + | * Joseph Deering, Jianyu Chen, Dalia Mahmoud, Tengteng Tang, Yujing Lin, Qiyin Fang, Greg Wohl, Mo Elbestawi, Kathryn Grandfield, "Characterizing Mineral Ellipsoids in New Bone Formation at the Interface of Ti6Al4V Porous Implants." Adv. Mater. Interfaces 2023, 10, 2300333. [[https://doi.org/10.1002/admi.202300333|online]] | ||
| * Mostafa Yakout, Ian Phillips, M.A. Elbestawi, Qiyin Fang, "In-situ monitoring and detection of spatter agglomeration and delamination during laser-based powder bed fusion of Invar 36," Optics & Laser Technology, 136, 106741, 2020, doi:10.1016/j.optlastec.2020.106741. ([[https://doi.org/10.1016/j.optlastec.2020.106741|Online]]) | * Mostafa Yakout, Ian Phillips, M.A. Elbestawi, Qiyin Fang, "In-situ monitoring and detection of spatter agglomeration and delamination during laser-based powder bed fusion of Invar 36," Optics & Laser Technology, 136, 106741, 2020, doi:10.1016/j.optlastec.2020.106741. ([[https://doi.org/10.1016/j.optlastec.2020.106741|Online]]) | ||
| * Samuel Peter, Morgan Richards, Qiyin Fang, Adrian Kitai, "Enhanced red emission of glycothermally synthesized Ce:YAG nanophosphors via Mn2+ addition," Materials Chemistry and Physics, 277:125497, 2022 ([[https://doi.org/10.1016/j.matchemphys.2021.125497|Science Direct Online]]) | * Samuel Peter, Morgan Richards, Qiyin Fang, Adrian Kitai, "Enhanced red emission of glycothermally synthesized Ce:YAG nanophosphors via Mn2+ addition," Materials Chemistry and Physics, 277:125497, 2022 ([[https://doi.org/10.1016/j.matchemphys.2021.125497|Science Direct Online]]) | ||
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| === Technology in Aging & Rehabilitation === | === Technology in Aging & Rehabilitation === | ||
| + | * Michael Zon, Guha Ganesh, M. Jamal Deen, and Qiyin Fang, "Context-Aware Medical Systems within Healthcare Environments: A Systematic Scoping Review to Identify Subdomains and Significant Medical Contexts" International Journal of Environmental Research and Public Health, 20(14): 6399, 2023 [[https://doi.org/10.3390/ijerph20146399|Open Access doi:10.3390/ijerph20146399]] | ||
| * Brenda Vrkljan, Marla K. Beauchamp, Paula Gardner, Qiyin Fang, Ayse Kuspinar, Paul D. McNicholas, K. Bruce Newbold, Julie Richardson, Darren Scott, Manaf Zargoush and Vincenza Gruppuso, "Re-engaging in Aging and Mobility Research in the COVID-19 Era: Early Lessons from Pivoting a Large-Scale, Interdisciplinary Study amidst a Pandemic," Canadian Journal on Aging / La Revue Canadienne Du Vieillissement, 1-7, 2021, doi:10.1017/S0714980821000374 ([[http://doi.org/10.1017/S0714980821000374|Open Access]]) | * Brenda Vrkljan, Marla K. Beauchamp, Paula Gardner, Qiyin Fang, Ayse Kuspinar, Paul D. McNicholas, K. Bruce Newbold, Julie Richardson, Darren Scott, Manaf Zargoush and Vincenza Gruppuso, "Re-engaging in Aging and Mobility Research in the COVID-19 Era: Early Lessons from Pivoting a Large-Scale, Interdisciplinary Study amidst a Pandemic," Canadian Journal on Aging / La Revue Canadienne Du Vieillissement, 1-7, 2021, doi:10.1017/S0714980821000374 ([[http://doi.org/10.1017/S0714980821000374|Open Access]]) | ||
| * Henry Y.-H. Siu, B. Delleman, J. Langevin, Dee Mangin, Michelle Howard, Qiyin Fang, David Price, David Chan, "Demonstrating a Technology-Mediated Intervention to Support Medication Adherence in Community-Dwelling Older Adults in Primary Care: A Feasibility Study." Gerontology and Geriatric Medicine, 5:1-11, 2019, doi.org/10.1177/2333721419845179 ([[https://doi.org/10.1177/2333721419845179|online]]) | * Henry Y.-H. Siu, B. Delleman, J. Langevin, Dee Mangin, Michelle Howard, Qiyin Fang, David Price, David Chan, "Demonstrating a Technology-Mediated Intervention to Support Medication Adherence in Community-Dwelling Older Adults in Primary Care: A Feasibility Study." Gerontology and Geriatric Medicine, 5:1-11, 2019, doi.org/10.1177/2333721419845179 ([[https://doi.org/10.1177/2333721419845179|online]]) | ||
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| === General Reviews & Editorials === | === General Reviews & Editorials === | ||
| + | * Qiyin Fang, Charles Kervrann, David Nolte, Oxana Semyachkina-Glushkovskaya, Shuo Tang, Yuji Matsuura, and Zachary Smith, "Editorial Introduction to JSTQE Special Issue on Biophotonics (2023)," IEEE Journal of Selected Topics in Quantum Electronics, 29(4):1-4 Biophotonics, July-Aug. 2023, Art no. 0200403, [[http://doi.org/10.1109/JSTQE.2023.3287745|Open Access doi: 10.1109/JSTQE.2023.3287745]]. | ||
| * Thomas Beyer, Dale L. Bailey, Udo J. Birk, Irene Buvat, Ciprian Catana, Zhen Cheng, Qiyin Fang, Federico Giove, Claudia Kuntner, Elmar Laistler, Francesco Moscato, Stephan G. Nekolla, Ivo Rausch, Itamar Ronen, Simo Saarakkala, Kris Thielemans, Wouter van Elmpt, and Ewald Moser, "Medical Physics and Imaging–A Timely Perspective," Frontiers in Physics, 9: 206, 2021. doi.org/10.3389/fphy.2021.634693, ([[https://www.frontiersin.org/article/10.3389/fphy.2021.634693|Open Access]]) | * Thomas Beyer, Dale L. Bailey, Udo J. Birk, Irene Buvat, Ciprian Catana, Zhen Cheng, Qiyin Fang, Federico Giove, Claudia Kuntner, Elmar Laistler, Francesco Moscato, Stephan G. Nekolla, Ivo Rausch, Itamar Ronen, Simo Saarakkala, Kris Thielemans, Wouter van Elmpt, and Ewald Moser, "Medical Physics and Imaging–A Timely Perspective," Frontiers in Physics, 9: 206, 2021. doi.org/10.3389/fphy.2021.634693, ([[https://www.frontiersin.org/article/10.3389/fphy.2021.634693|Open Access]]) | ||
| * Ilko K. Ilev, David Nolte, Qiyin Fang, Giuliano Scarcelli, Yuji Matsuura, William Calhoun, Thomas Huser, "Editorial Introduction to JSTQE Special Issue on Biophotonics," IEEE Journal of Selected Topics in Quantum Electronics, 27(4): 0200404, 2021, doi.org/10.1109/JSTQE.2021.3072401 ([[http://doi.org/10.1109/JSTQE.2021.3072401|online]]) | * Ilko K. Ilev, David Nolte, Qiyin Fang, Giuliano Scarcelli, Yuji Matsuura, William Calhoun, Thomas Huser, "Editorial Introduction to JSTQE Special Issue on Biophotonics," IEEE Journal of Selected Topics in Quantum Electronics, 27(4): 0200404, 2021, doi.org/10.1109/JSTQE.2021.3072401 ([[http://doi.org/10.1109/JSTQE.2021.3072401|online]]) | ||
| - | ===== Current Regular Schedule (Fall 2020) ===== | + | ===== Current Regular Schedule (Fall 2023) ===== |
| ^ Time ^ Monday ^ Tuesday ^ Wednesday ^ Thursday ^ Friday ^ | ^ Time ^ Monday ^ Tuesday ^ Wednesday ^ Thursday ^ Friday ^ | ||
| - | | 8:30 - 9:30 | EP4I03 | | EP4I03 | | | | + | | 8:30 - 9:30 | | | | | | |
| - | | 9:30 - 10:30 | EP4I03 | | | | | | + | | 9:30 - 10:30 | | | | | | |
| | 10:30 - 11:30 | | | | | | | | 10:30 - 11:30 | | | | | | | ||
| - | | 11:30 - 12:30 | Group meeting | | | | | | + | | 11:30 - 12:30 | | | | | | |
| - | | 12:30 - 13:30 | | | iBEHS 1P10 | | | | + | | 12:30 - 13:30 | iBEHS 1P10 | iBEHS 4F04 | | iBEHS 4F04 | | |
| - | | 13:30 - 14:30 | | | iBEHS 1P10 | iBEHS 3P04 | iBEHS 3P04 | | + | | 13:30 - 14:30 | iBEHS 1P10 | | | iBEHS 4F04 | | |
| - | | 14:30 - 15:30 | | | | | iBEHS 3P04 | | + | | 14:30 - 15:30 | EP 4US2 | | | | | |
| - | | 15:30 - 16:30 | | | | | | | + | | 15:30 - 16:30 | EP 4US2 | | | | | |
| - | | 16:30 - 17:30 | | | | | | | + | | 16:30 - 17:30 | EP 4US2 | | | | | |
| | 17:30 - 18:30 | | | | | | | | 17:30 - 18:30 | | | | | | | ||
