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public:publications 2021/12/22 02:04 public:publications 2024/03/25 06:22 current
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====== Publications ====== ====== Publications ======
 +===== 2024 =====
 +  * Qiyin Fang, Morgan Richards, Yiping Wang, (2024). Sampling-Based Two-Dimensional Temporal Imaging. In: Liang, J. (eds) Coded Optical Imaging. Springer, Cham. [[https://doi.org/10.1007/978-3-031-39062-3_24|doi:10.1007/978-3-031-39062-3_24]]
 +  * Sarah Costa, Qiyin Fang, Thomas Farrell, Erica Dao, Mic Farquharson, "Time-resolved fluorescence and diffuse reflectance for lung squamous carcinoma margin detection," Lasers in Surgery & Medicine 2024; 1–9. [[https://doi.org/10.1002/lsm.23761|doi:10.1002/lsm.23761]].
 +===== 2023 =====
 +  * Joseph Deering, Dalia Mahmoud, Elyse Rier, Yujing Lin, Anna Cecilia do Nascimento Pereira, Silvia Titotto, Qiyin Fang, Gregory R. Wohl, Feilong Deng, Kathryn Grandfield, Mohamed A. Elbestawi, Jianyu Chen, "Osseointegration of functionally graded Ti6Al4V porous implants: Histology of the pore network," Biomaterials Advances, 155, 213697, 2023, [[https://doi.org/10.1016/j.bioadv.2023.213697|/doi 10.1016/j.bioadv.2023.213697]]
 +  * Joseph Deering, Jianyu Chen, Dalia Mahmoud, Tengteng Tang, Yujing Lin, Qiyin Fang, Greg Wohl, Mo Elbestawi, Kathryn Grandfield, "Characterizing Mineral Ellipsoids in New Bone Formation at the Interface of Ti6Al4V Porous Implants." Adv. Mater. Interfaces 2023, 10, 2300333. [[https://doi.org/10.1002/admi.202300333|online]]
 +  * Erica Dao, Gabriella Gohla, Phillip Williams, Peter Lovrics, Fares Badr, Qiyin Fang, Thomas J. Farrell, Michael J. Farquharson, "Multivariate analysis of breast tissue using optical parameters extracted from a combined time-resolved fluorescence and diffuse reflectance system for tumor margin detection," J. Biomed. Opt. 28(8) 085001, [[https://doi.org/10.1117/1.JBO.28.8.085001|Open Access]]
 +  * Xu Mei, Qiyin Fang, and P. Ravi Selvaganapathy, "Three-dimensional oxygen concentration monitoring in hydrogels using low-cost phosphorescence lifetime imaging for tissue engineering," Biomed. Opt. Express 14, 4759-4774 (2023) [[https://opg.optica.org/boe/fulltext.cfm?uri=boe-14-9-4759|Open Access]]
 +  * Erica Dao, Gabriela Gohla, Phillip Williams, Peter Lovrics, Fares Badr, Qiyin Fang, Thomas Farrell, Michael Farquharson, "Breast tissue analysis using a clinically compatible combined time-resolved fluorescence and diffuse reflectance (TRF-DR) system," Lasers Surg Med. 2023; 55(8):769-783. [[https://doi.org/10.1002/lsm.23710|online]]
 +  * Qiyin Fang, Charles Kervrann, David Nolte, Oxana Semyachkina-Glushkovskaya, Shuo Tang, Yuji Matsuura, and Zachary Smith, "Editorial Introduction to JSTQE Special Issue on Biophotonics (2023)," IEEE Journal of Selected Topics in Quantum Electronics, 29(4):1-4 Biophotonics, July-Aug. 2023, Art no. 0200403, [[http://doi.org/10.1109/JSTQE.2023.3287745|Open Access doi: 10.1109/JSTQE.2023.3287745]].
 +  * Michael Zon, Guha Ganesh, M. Jamal Deen, and Qiyin Fang, "Context-Aware Medical Systems within Healthcare Environments: A Systematic Scoping Review to Identify Subdomains and Significant Medical Contexts" International Journal of Environmental Research and Public Health, 20(14): 6399, 2023 [[https://doi.org/10.3390/ijerph20146399|Open Access doi:10.3390/ijerph20146399]]
 +  * Jacob Saunders, M. Elbestawi, and Qiyin Fang, "Ultrafast Laser Additive Manufacturing: A Review," J. Manuf. Mater. Process. 2023, 7, 89. [[https://doi.org/10.3390/jmmp7030089|Open Access doi:10.3390/jmmp7030089]]
 +  * Elizabeth J. Osterlund, Nehad Hirmiz, Dang Nguyen, James M. Pemberton, Qiyin Fang, David Andrews, "Endoplasmic reticulum protein BIK binds to and inhibits mitochondria-localized anti-apoptotic proteins" Journal of Biological Chemistry, 299(4):104581, 2023, [[https://doi.org/10.1016/j.jbc.2022.102863|Online doi: 10.1016/j.jbc.2022.102863]]
 +===== 2022 =====
 +  * Ian H. D. Phillips, David Armstrong and Qiyin Fang, "A Real-Time Endoscope Motion Tracker," IEEE Journal of Translational Engineering in Health and Medicine, 10:1-9, 2022, ([[http://doi.org/10.1109/JTEHM.2022.3214148|Open Access]]).
 +  * Elizabeth J. Osterlund, Nehad Hirmiz, James M. Pemberton, Qiyin Fang, David Andrews, "Automated, quantitative Fast FLIM-FRET (qF3):A step-by-step protocol to measure dissociation constants for protein-protein interactions in live-cell screening applications," Protocol Exchange, 25 April 2022, [[https://doi.org/10.21203/rs.3.pex-1354/v1|Online doi: 10.21203/rs.3.pex-1354]]
 +  * Elizabeth J. Osterlund, Nehad Hirmiz, James M. Pemberton, Adrien Nougarede, Qian Liu, Brian Leber, Qiyin Fang, and David W. Andrews, "Efficacy and specificity of inhibitors of BCL-2 family protein interactions assessed by affinity measurements in live cells," Science Advances, 8(16): 2022, doi: 10.1126/sciadv.abm7375 ([[https://doi.org/10.1126/sciadv.abm7375|Open Access]])
 +  * Samuel Peter, Morgan Richards, Qiyin Fang, Adrian Kitai, "Enhanced red emission of glycothermally synthesized Ce:YAG nanophosphors via Mn2+ addition," Materials Chemistry and Physics, 277:125497, 2022 ([[https://doi.org/10.1016/j.matchemphys.2021.125497|Science Direct Online]])
===== 2021 ===== ===== 2021 =====
-  * Wenbin Zhang, Fahad Alghannam, Yingchao Zhu, Jianfei Zhang, Gregory R. Wohl, Harold K. Haugen, Zhipeng Qin, Guoqiang Xie, Qiyin Fang and Steve Guofang Shen, "Effects of Drilling Technology on Mini-Implant Primary Stability: A Comparison of the Mechanical Drilling and Femtosecond Laser Ablation," Frontiers in Physics 9:766644, 2021. ([[http:doi.org://10.3389/fphy.2021.766644|Open Access]])+  * Wenbin Zhang, Fahad Alghannam, Yingchao Zhu, Jianfei Zhang, Gregory R. Wohl, Harold K. Haugen, Zhipeng Qin, Guoqiang Xie, Qiyin Fang and Steve Guofang Shen, "Effects of Drilling Technology on Mini-Implant Primary Stability: A Comparison of the Mechanical Drilling and Femtosecond Laser Ablation," Frontiers in Physics 9:766644, 2021. ([[https://www.frontiersin.org/articles/10.3389/fphy.2021.766644|Open Access]])
  * Bo Xiong, Tian-Qi Hong, Herb Schellhorn, Qiyin Fang, "Dual-Modality Imaging Microfluidic Cytometer for Onsite Detection of Phytoplankton," Photonics 8, 435, 2021. doi:10.3390/photonics8100435 ([[https://doi.org/10.3390/photonics8100435|Open Access]])   * Bo Xiong, Tian-Qi Hong, Herb Schellhorn, Qiyin Fang, "Dual-Modality Imaging Microfluidic Cytometer for Onsite Detection of Phytoplankton," Photonics 8, 435, 2021. doi:10.3390/photonics8100435 ([[https://doi.org/10.3390/photonics8100435|Open Access]])
-  * Brenda Vrkljan, Marla K. Beauchamp, Paula Gardner, Qiyin Fang, Ayse Kuspinar, Paul D. McNicholas, K. Bruce Newbold, Julie Richardson, Darren Scott, Manaf Zargoush and Vincenza Gruppuso, "Re-engaging in Aging and Mobility Research in the COVID-19 Era: Early Lessons from Pivoting a Large-Scale, Interdisciplinary Study amidst a Pandemic," Canadian Journal on Aging / La Revue Canadienne Du Vieillissement, 1-7, 2021, doi:10.1017/S0714980821000374 ([[http://doi.org/10.1017/S0714980821000374|Open Access]])+  * Brenda Vrkljan, Marla K. Beauchamp, Paula Gardner, Qiyin Fang, Ayse Kuspinar, Paul D. McNicholas, K. Bruce Newbold, Julie Richardson, Darren Scott, Manaf Zargoush and Vincenza Gruppuso, "Re-engaging in Aging and Mobility Research in the COVID-19 Era: Early Lessons from Pivoting a Large-Scale, Interdisciplinary Study amidst a Pandemic," Canadian Journal on Aging / La Revue Canadienne Du Vieillissement, 40(4):1-7, 2021, doi:10.1017/S0714980821000374 ([[http://doi.org/10.1017/S0714980821000374|Open Access]])
  * Thomas Beyer, Dale L. Bailey, Udo J. Birk, Irene Buvat, Ciprian Catana, Zhen Cheng, Qiyin Fang, Federico Giove, Claudia Kuntner, Elmar Laistler, Francesco Moscato, Stephan G. Nekolla, Ivo Rausch, Itamar Ronen, Simo Saarakkala, Kris Thielemans, Wouter van Elmpt, and Ewald Moser, "Medical Physics and Imaging–A Timely Perspective," Frontiers in Physics, 9: 206, 2021. doi.org/10.3389/fphy.2021.634693, ([[https://www.frontiersin.org/article/10.3389/fphy.2021.634693|Open Access]])   * Thomas Beyer, Dale L. Bailey, Udo J. Birk, Irene Buvat, Ciprian Catana, Zhen Cheng, Qiyin Fang, Federico Giove, Claudia Kuntner, Elmar Laistler, Francesco Moscato, Stephan G. Nekolla, Ivo Rausch, Itamar Ronen, Simo Saarakkala, Kris Thielemans, Wouter van Elmpt, and Ewald Moser, "Medical Physics and Imaging–A Timely Perspective," Frontiers in Physics, 9: 206, 2021. doi.org/10.3389/fphy.2021.634693, ([[https://www.frontiersin.org/article/10.3389/fphy.2021.634693|Open Access]])
  * Ilko K. Ilev, David Nolte, Qiyin Fang, Giuliano Scarcelli, Yuji Matsuura, William Calhoun, Thomas Huser, "Editorial Introduction to JSTQE Special Issue on Biophotonics," IEEE Journal of Selected Topics in Quantum Electronics, 27(4): 0200404, 2021, doi.org/10.1109/JSTQE.2021.3072401 ([[http://doi.org/10.1109/JSTQE.2021.3072401|online]])   * Ilko K. Ilev, David Nolte, Qiyin Fang, Giuliano Scarcelli, Yuji Matsuura, William Calhoun, Thomas Huser, "Editorial Introduction to JSTQE Special Issue on Biophotonics," IEEE Journal of Selected Topics in Quantum Electronics, 27(4): 0200404, 2021, doi.org/10.1109/JSTQE.2021.3072401 ([[http://doi.org/10.1109/JSTQE.2021.3072401|online]])
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  *  Tianyi Guo, M. Jamal Deen, C-Q, Xu, Qiyin Fang, P. Ravi Selvaganapathy, Haiying Zhang, “Observation of ultraslow stress release in silicon nitride film on CaF2,” J. of Vacuum Science & Technology A, 33, 041515, 2015 ({{:public:publications:deenmj_guot_fangq_sin_2015.pdf|PDF}})   *  Tianyi Guo, M. Jamal Deen, C-Q, Xu, Qiyin Fang, P. Ravi Selvaganapathy, Haiying Zhang, “Observation of ultraslow stress release in silicon nitride film on CaF2,” J. of Vacuum Science & Technology A, 33, 041515, 2015 ({{:public:publications:deenmj_guot_fangq_sin_2015.pdf|PDF}})
  *  R. Liu, Z. Zhao, L. Zou, Q. Fang, L. Chen, A. Argento, J. F. Lo, "Compact, non-invasive frequency domain lifetime differentiation of collagens and elastin," Sensors and Actuators, B: Chemical, 219(8): 289-293, 2015 ({{:public:publications:lojf_liur_fangq_fd_lifetime_collagen_elastin_2015.pdf|PDF}})   *  R. Liu, Z. Zhao, L. Zou, Q. Fang, L. Chen, A. Argento, J. F. Lo, "Compact, non-invasive frequency domain lifetime differentiation of collagens and elastin," Sensors and Actuators, B: Chemical, 219(8): 289-293, 2015 ({{:public:publications:lojf_liur_fangq_fd_lifetime_collagen_elastin_2015.pdf|PDF}})
-  *  Samir Sahli, Roy, C. C. Wang, Aparna Murthy, David Armstrong, M. Jamal Deen, and Qiyin Fang, "A 360 degree side view endoscope for lower GI tract mapping," Physics in Canada, 71(1): 18-20, 2015 ([[https://pic-pac.cap.ca/static/downloads/f490294cc6d92c8807b096739f2f7271ca7274d3.pdf|PDF]])+  *  Samir Sahli, Roy, C. C. Wang, Aparna Murthy, David Armstrong, M. Jamal Deen, and Qiyin Fang, "A 360 degree side view endoscope for lower GI tract mapping," Physics in Canada, 71(1): 18-20, 2015 ([[https://pic-pac.cap.ca/index.php/Issues/showpdf/article/v71n1.0-a2394.pdf|PDF]])
  * Shu-Chi Allison Yeh, Celine S.N. Ling, David W. Andrews, Michael S. Patterson, Kevin R. Diamond, Joseph E. Hayward, David Armstrong, and Qiyin Fang, "5-aminolevulinic acid for quantitative seek-and-treat of high-grade dysplasia in Barrett’s Esophagus cellular models," Journal of Biomedical Optics, 20(2):028002, 2015 ({{:public:publications:allison_be_ablation_2015.pdf|PDF}}).   * Shu-Chi Allison Yeh, Celine S.N. Ling, David W. Andrews, Michael S. Patterson, Kevin R. Diamond, Joseph E. Hayward, David Armstrong, and Qiyin Fang, "5-aminolevulinic acid for quantitative seek-and-treat of high-grade dysplasia in Barrett’s Esophagus cellular models," Journal of Biomedical Optics, 20(2):028002, 2015 ({{:public:publications:allison_be_ablation_2015.pdf|PDF}}).
  * Shu-Chi Allison Yeh, Samir Sahli, David W. Andrews, Michael S. Patterson, David Armstrong, John Provias, and Qiyin Fang, "5-aminolevulinic acid induced protoporphyrin IX as a fluorescence marker for quantitative image analysis of high-grade dysplasia in Barrett's esophagus cellular models," Journal of Biomedical Optics, 20(3):036010, 2015 ({{:public:publications:allison_be_imaging_2015.pdf|PDF}}).   * Shu-Chi Allison Yeh, Samir Sahli, David W. Andrews, Michael S. Patterson, David Armstrong, John Provias, and Qiyin Fang, "5-aminolevulinic acid induced protoporphyrin IX as a fluorescence marker for quantitative image analysis of high-grade dysplasia in Barrett's esophagus cellular models," Journal of Biomedical Optics, 20(3):036010, 2015 ({{:public:publications:allison_be_imaging_2015.pdf|PDF}}).

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